BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F05SP1|AL426069
(862 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig932 1638 0.0
>3x_Contig932
Length = 3027
Score = 1638 bits (825), Expect = 0.0
Identities = 849/855 (99%), Gaps = 2/855 (0%)
Strand = Plus / Plus
Query: 10 aatccggtcaaagagtcgctaatcaatcttggtctactaaggaggtcgaaattatcaact 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 aatccggtcaaagagtcgctaatcaatcttggtctactaaggaggtcgaaattatcaact 1116
Query: 70 ctatgttcttgttgacagcaaaaccttctatttatttgattaacttatccgaaagagatt 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 ctatgttcttgttgacagcaaaaccttctatttatttgattaacttatccgaaagagatt 1176
Query: 130 atatcagaaagaagaacaagcatttgttgaagattaaggaatgggttgacaaatactccc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1177 atatcagaaagaagaacaagcatttgttgaagattaaggaatgggttgacaaatactccc 1236
Query: 190 caggtgatttgatcattccattctctgtctgtctagaagaaaaattatcccatatgacag 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1237 caggtgatttgatcattccattctctgtctgtctagaagaaaaattatcccatatgacag 1296
Query: 250 aagaagaagctgaagaagaactaaagaacctaggcgttcaatctgctctaccaaagatcg 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 aagaagaagctgaagaagaactaaagaacctaggcgttcaatctgctctaccaaagatcg 1356
Query: 310 ttaccaccatgagagaaaagttggatttgatctccttcttcacttgtggtccagatgaag 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 ttaccaccatgagagaaaagttggatttgatctccttcttcacttgtggtccagatgaag 1416
Query: 370 ttagagaatggactattagaagaggaactaaagctccccaagctgcaggtgtcattcaca 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 ttagagaatggactattagaagaggaactaaagctccccaagctgcaggtgtcattcaca 1476
Query: 430 atgatttaatgaacactttcatcttagctcaagttatgaaatacgaagatgtggtcgaat 489
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1477 atgatttaatgcagactttcatcttagctcaagttatgaaatacgaagatgtggtcgaat 1536
Query: 490 acaaagatgacaatgcca-ttaaggccgca-gtaaattgcaacagaagggtaaggaatac 547
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1537 acaaagatgacaatgccatttaaggccgcaggtaaattgcaacagaagggtaaggaatac 1596
Query: 548 gttgttgaagacggtgatatcatctacttcagagccggtgccggtaagaattgagagaac 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1597 gttgttgaagacggtgatatcatctacttcagagccggtgccggtaagaattgagagaac 1656
Query: 608 atcacaattataggacccgtcatattacaagggttgacattgcttgcatattgctcacga 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1657 atcacaattataggacccgtcatattacaagggttgacattgcttgcatattgctcacga 1716
Query: 668 acaatgaggcccccmcttctcttttttagttgttaatttcagtccataattctcatatat 727
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1717 acaatgaggcccccacttctcttttttagttgttaatttcagtccataattctcatatat 1776
Query: 728 aaatttcatgcctcatcgttatatggctaacgtaacgtccgtyattcaagaatgaaaata 787
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1777 aaatttcatgcctcatcgttatatggctaacgtaacgtccgtaattcaagaatgaaaata 1836
Query: 788 ccctactgaaaacgtatatttgatgtgttaatgttaaatactgagcttacatgaagttgc 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1837 ccctactgaaaacgtatatttgatgtgttaatgttaaatactgagcttacatgaagttgc 1896
Query: 848 gaaacacgctttatt 862
|||||||||||||||
Sbjct: 1897 gaaacacgctttatt 1911
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7847
Number of Sequences: 1807
Number of extensions: 7847
Number of successful extensions: 70
Number of sequences better than 1.0e-20: 1
length of query: 862
length of database: 10,358,551
effective HSP length: 16
effective length of query: 846
effective length of database: 10,329,639
effective search space: 8738874594
effective search space used: 8738874594
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)